STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23166.1Pentapeptide repeat protein; COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: srm:SRM_01933 conserved hypothetical protein, membrane containing pentapeptide repeat; PFAM: pentapeptide repeat protein; SPTR: Pentapeptide repeat family protein; PFAM: Pentapeptide repeats (8 copies). (280 aa)    
Predicted Functional Partners:
ADR23124.1
PKD domain containing protein; InterPro IPR013517: IPR000601; KEGG: phe:Phep_2593 conserved repeat domain protein; PFAM: PKD domain containing protein; FG-GAP repeat protein; SMART: PKD domain containing protein; SPTR: Conserved repeat domain protein; PFAM: PKD domain.
  
     0.761
ADR21362.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2; PFAM: Tetratricopeptide repeat.
 
  
 0.749
ADR23131.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665: IPR013026; KEGG: chu:CHU_1558 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
 
 0.670
ADR23121.1
FG-GAP repeat protein; InterPro IPR013517: IPR018294; KEGG: fps:FP0688 hypothetical protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat domain protein.
  
     0.629
ADR20212.1
PKD domain containing protein; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: phe:Phep_0242 PKD domain containing protein; PFAM: PKD domain containing protein; SPTR: PKD; PFAM: PKD domain.
  
     0.614
ADR23599.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR018247: IPR012910: IPR000531; KEGG: hoh:Hoch_5117 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative exported TonB-dependent receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.610
ADR23167.1
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: dfe:Dfer_0419 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: Predicted dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
       0.580
ADR20028.1
KEGG: aav:Aave_4086 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.576
ADR20906.1
Hemagluttinin repeat-containing protein; InterPro IPR008619; KEGG: cpi:Cpin_4916 hypothetical protein; PFAM: Haemagluttinin repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.541
ADR20800.1
KEGG: dfe:Dfer_2677 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.538
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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