STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23190.1Peptidoglycan-binding lysin domain; InterPro IPR018392: IPR002482; KEGG: chu:CHU_2842 LysM repeat-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Possible LysM domain; PFAM: LysM domain. (498 aa)    
Predicted Functional Partners:
ADR23191.1
InterPro IPR014127; KEGG: dfe:Dfer_5052 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757.
       0.797
ADR23307.1
COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterProIPR008258: IPR018392: IPR013838: IPR000189: IPR 002482; KEGG: chu:CHU_0026 peptidoglycan-binding lytic transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative lytic murein transglycosylase; PFAM: Transglycosylase SLT domain; LysM domain.
  
 0.721
ADR22903.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR019734: IPR013026: IPR006665: IPR011659: IPR 006664: IPR018521; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.678
ADR20808.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2993 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Possible outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.595
ADR21014.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2008 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.595
ADR23131.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665: IPR013026; KEGG: chu:CHU_1558 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.595
ADR23296.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR011659: IPR006665: IPR006664: IPR013026: IPR 019734; KEGG: sli:Slin_5203 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.595
ADR20448.1
Peptidase M23; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR008756: IPR016047: IPR002508; KEGG: cat:CA2559_07981 TonB; PFAM: Peptidase M23; peptidase M56 BlaR1; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: M23/M37 peptidase domain protein; PFAM: BlaR1 peptidase M56; N-acetylmuramoyl-L-alanine amidase; Peptidase family M23.
 
 
 0.578
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 0.568
ADR22476.1
Lytic transglycosylase catalytic; InterPro IPR008258; KEGG: gfo:GFO_1070 membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase catalytic; SPTR: Putative membrane-bound lytic murein transglycosylase; PFAM: Transglycosylase SLT domain.
  
 0.532
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.