STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23196.1Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR001440: IPR019734: IPR013026; KEGG: chu:CHU_3775 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat family. (946 aa)    
Predicted Functional Partners:
ADR23356.1
CHASE2 domain protein; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890; KEGG: chu:CHU_3026 hypothetical protein; PFAM: CHASE2 domain protein; SPTR: Putative uncharacterized protein; PFAM: CHASE2 domain.
 
     0.777
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
 
     0.764
ADR21099.1
Peptidase C14 caspase catalytic subunit p20; InterPro IPR011600; KEGG: hch:HCH_04244 TPR repeat-containing protein; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Tetratricopeptide repeat family protein, putative; PFAM: Caspase domain.
 
     0.757
ADR22179.1
Cyclic nucleotide-binding protein; COGs: COG3202 ATP/ADP translocase; InterPro IPR000595; KEGG: chu:CHU_1022 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
  
     0.748
ADR20873.1
Hypothetical protein; InterPro IPR019775: IPR019782: IPR017986: IPR001680; KEGG: chu:CHU_1024 hypothetical protein; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
 
     0.735
ADR23527.1
Protein of unknown function DUF1800; COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: chu:CHU_3363 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800).
  
     0.647
ADR23160.1
FG-GAP repeat protein; InterPro IPR013517: IPR018294; KEGG: mxa:MXAN_1046 FG-GAP repeat-HVR domain-containing protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat domain protein.
  
     0.635
ADR23528.1
Protein of unknown function DUF1501; COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR010869; KEGG: chu:CHU_3364 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
  
     0.622
ADR23121.1
FG-GAP repeat protein; InterPro IPR013517: IPR018294; KEGG: fps:FP0688 hypothetical protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat domain protein.
  
     0.612
ADR23126.1
InterPro IPR011123: IPR005829; KEGG: fjo:Fjoh_1559 two component regulator; PFAM: Two component regulator three Y domain-containing protein; SPTR: Two component regulator three Y motif family; PFAM: Y_Y_Y domain.
  
     0.607
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.