STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADR23204.1KEGG: chu:CHU_0793 sensor histidine kinase; SPTR: Putative uncharacterized protein. (325 aa)    
Predicted Functional Partners:
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
  
 
 0.757
ADR23203.1
KEGG: fps:FP0665 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.668
ADR22279.1
PAS sensor protein; InterPro IPR000014: IPR000700; KEGG: mev:Metev_0453 signal transduction histidine kinase; SPTR: Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 
 
 0.605
ADR23704.1
Putative PAS/PAC sensor protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000014: IPR000700: IPR003660: IPR003018: IPR 013767: IPR010822; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: PAS fold domain protein; histidine kinase HAMP region domain protein; GAF domain protein; Stage II sporulation protein E; SMART: PAS domain containing protein; SPTR: Serine/threonine protein kinases; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.587
ADR20048.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000780: IPR000673: IPR013767: IPR003661: IPR 003594: IPR000014: IPR001610: IPR005467: IPR000700: IPR002052; KEGG: cts:Ctha_1653 signal transduction histidine kinase with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; PAC repeat-containing pr [...]
 
 
 
 0.581
ADR20406.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR004358: IPR013655: IPR013767: IPR 003661: IPR003594: IPR001789: IPR001610: IPR005467: IPR000700; KEGG: zpr:ZPR_2293 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat- [...]
  
 
 0.574
ADR21796.1
Serine/threonine protein kinase; COGs: COG3899 ATPase; InterProIPR017442: IPR003018: IPR010822: IPR002290: IPR 020635: IPR000719; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: Serine/threonine-protein kinase-like domain; GAF domain protein; Stage II sporulation protein E; SMART: GAF domain protein; serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase with GAF domain; PFAM: Protein kinase domain; GAF domain; Stage II sporulation protein E (SpoIIE).
 
  
 0.553
ADR22382.1
Histidine kinase HAMP region domain protein; InterPro IPR003660: IPR003018; KEGG: lbl:LBL_1299 sensor histidine kinase and response regulator of a two component complex; PFAM: histidine kinase HAMP region domain protein; GAF domain protein; SMART: GAF domain protein; SPTR: GAF Sensor Hybrid Histidine Kinase, putative; PFAM: HAMP domain; GAF domain.
 
   
 0.539
ADR23356.1
CHASE2 domain protein; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890; KEGG: chu:CHU_3026 hypothetical protein; PFAM: CHASE2 domain protein; SPTR: Putative uncharacterized protein; PFAM: CHASE2 domain.
 
     0.515
ADR22242.1
PAS sensor protein; InterPro IPR000014; KEGG: azo:azo3685 putative hybrid sensor and regulator protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 
 
 0.510
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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