STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23234.1KEGG: sli:Slin_5311 hypothetical protein; SPTR: Putative uncharacterized protein. (277 aa)    
Predicted Functional Partners:
ADR23231.1
KEGG: sli:Slin_5314 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR23232.1
InterPro IPR002696; KEGG: sli:Slin_5313 protein of unknown function DUF37; PFAM: protein of unknown function DUF37; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF37.
       0.789
ADR23233.1
KEGG: sli:Slin_5312 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR23230.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.590
ADR20195.1
Hypothetical protein; InterPro IPR018391; KEGG: mac:MA4312 cell surface protein; SPTR: Cell surface protein.
   
 
 0.498
ADR22782.1
KEGG: rmr:Rmar_2561 hypothetical protein; SPTR: Outer membrane lipoprotein, putative.
   
 
 0.498
ADR23251.1
Hypothetical protein; KEGG: fjo:Fjoh_2960 LVIVD repeat-containing protein; SPTR: Putative uncharacterized protein.
   
 
 0.498
ADR23229.1
Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933: IPR011650: IPR017439: IPR010168; KEGG: csa:Csal_1797 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Cellulose synthesis protein; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase.
       0.414
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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