STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23278.1COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: gfo:GFO_0004 TerC family integral membrane protein; PFAM: Integral membrane protein TerC; SPTR: TerC family integral membrane protein; PFAM: Integral membrane protein TerC family. (250 aa)    
Predicted Functional Partners:
ADR22567.1
Gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR019862: IPR002550: IPR005170; KEGG: sli:Slin_5985 gliding motility-associated protein GldE; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Hemolysin-related protein, containing CBS domain; TIGRFAM: gliding motility-associated protein GldE; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE.
 
    0.902
ADR21082.1
Signal peptide peptidase SppA, 67K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634: IPR002142: IPR004635; KEGG: dfe:Dfer_2800 signal peptide peptidase SppA, 67K type; PFAM: peptidase S49; SPTR: Signal peptide peptidase SppA, 67K type; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type.
 
    0.623
ADR23279.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001440: IPR003661: IPR003594: IPR004358: IPR 019734: IPR005467: IPR013026; KEGG: chu:CHU_1092 aerobic respiration sensor-response protein; histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; SPTR: Aerobic respiration sensor-response protein; histidine protein kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPas [...]
       0.620
ADR23280.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR: Magnesium chelatase, subunit ChlI family protein; PFAM: Sigma-54 interaction domain.
       0.620
ADR23281.1
COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: dfe:Dfer_5786 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.616
ADR23276.1
COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: cpi:Cpin_0719 NAD metabolism ATPase/kinase-like protein; SPTR: ATPase/kinase involved in NAD metabolism-like protein; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type.
       0.490
ADR23277.1
COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: sde:Sde_3407 response regulator receiver domain-containing protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative transporter protein; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC.
       0.490
ADR23282.1
KEGG: sli:Slin_2497 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF833).
       0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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