STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23284.1Fatty acid hydroxylase; InterPro IPR006694; KEGG: chu:CHU_0011 fatty acid hydroxylase; PFAM: fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; PFAM: Fatty acid hydroxylase superfamily. (207 aa)    
Predicted Functional Partners:
ADR23283.1
Hypothetical protein; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: cch:Cag_1572 hypothetical protein; SPTR: WcaG protein.
  
 
 0.818
ADR23282.1
KEGG: sli:Slin_2497 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF833).
     
 0.600
ADR21461.1
COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060: IPR019845; KEGG: sli:Slin_5959 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthetase; PFAM: Squalene/phytoene synthase.
  
 
 0.547
ADR23285.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0012 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
       0.543
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 
 0.458
ADR22989.1
FAD dependent oxidoreductase; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076: IPR003042; KEGG: hau:Haur_2339 monooxygenase FAD-binding; PFAM: FAD dependent oxidoreductase; SPTR: Possible monooxygenase; PFAM: FAD binding domain.
   
 
 0.458
ADR23286.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR001466: IPR019800; KEGG: chu:CHU_0013 b-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; beta-lactamase; SPTR: B-glycosidase, glycoside hydrolase family 3 protein; PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase.
       0.409
ADR23279.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001440: IPR003661: IPR003594: IPR004358: IPR 019734: IPR005467: IPR013026; KEGG: chu:CHU_1092 aerobic respiration sensor-response protein; histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; SPTR: Aerobic respiration sensor-response protein; histidine protein kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPas [...]
  
    0.400
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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