STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23285.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0012 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1. (380 aa)    
Predicted Functional Partners:
bshC
Protein of unknown function UCP012535; COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: sli:Slin_5360 protein of unknown function UCP012535; PFAM: protein of unknown function UCP012535; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); Belongs to the BshC family.
  
   
 0.781
ADR20915.1
InterPro IPR009474; KEGG: dfe:Dfer_5785 protein of unknown function DUF1094; PFAM: protein of unknown function DUF1094; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1094); Belongs to the UPF0403 family.
  
     0.768
ADR20229.1
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737: IPR000276; KEGG: nve:NEMVE_v1g224788 hypothetical protein; PFAM: LmbE family protein; SPTR: GlcNAc-PI de-N-acetylase family protein; PFAM: GlcNAc-PI de-N-acetylase.
 
    0.765
ADR20382.1
KEGG: dfe:Dfer_3622 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2911).
  
    0.646
ADR22766.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG0492 Thioredoxin reductase; InterPro IPR003953: IPR000103: IPR013027; KEGG: cpi:Cpin_6573 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: HI0933-like protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.636
ADR20924.1
KEGG: rmr:Rmar_0373 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2911).
  
    0.630
ADR23283.1
Hypothetical protein; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: cch:Cag_1572 hypothetical protein; SPTR: WcaG protein.
  
    0.599
ADR23286.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR001466: IPR019800; KEGG: chu:CHU_0013 b-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; beta-lactamase; SPTR: B-glycosidase, glycoside hydrolase family 3 protein; PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase.
  
    0.589
ADR22046.1
KEGG: gfo:GFO_2947 hypothetical protein; SPTR: Lipoprotein, putative; PFAM: Protein of unknown function (DUF2911).
  
    0.577
ADR23284.1
Fatty acid hydroxylase; InterPro IPR006694; KEGG: chu:CHU_0011 fatty acid hydroxylase; PFAM: fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; PFAM: Fatty acid hydroxylase superfamily.
       0.543
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.