STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23308.1KEGG: bvu:BVU_2599 hypothetical protein; SPTR: Putative uncharacterized protein. (368 aa)    
Predicted Functional Partners:
ADR23307.1
COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterProIPR008258: IPR018392: IPR013838: IPR000189: IPR 002482; KEGG: chu:CHU_0026 peptidoglycan-binding lytic transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative lytic murein transglycosylase; PFAM: Transglycosylase SLT domain; LysM domain.
  
 
 0.857
ADR23314.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
    0.819
ADR21994.1
Hypothetical protein; InterPro IPR013026; KEGG: bvu:BVU_2563 hypothetical protein; SPTR: TPR domain protein.
 
    0.790
ADR20617.1
InterPro IPR003400; KEGG: zpr:ZPR_4542 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR.
  
   
 0.775
ADR20618.1
InterPro IPR003400; KEGG: rmr:Rmar_1719 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR.
  
   
 0.775
ADR20894.1
KEGG: gfo:GFO_1825 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
ADR20620.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: zpr:ZPR_4545 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.764
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.762
ADR22775.1
KEGG: zpr:ZPR_3745 membrane or secreted protein; SPTR: Putative uncharacterized protein.
  
     0.756
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
       0.751
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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