STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23317.1KEGG: cpi:Cpin_0367 hypothetical protein; SPTR: Putative uncharacterized protein. (254 aa)    
Predicted Functional Partners:
ADR20338.1
KEGG: sli:Slin_1995 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.675
ADR23316.1
KEGG: cat:CA2559_08806 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    
0.620
ADR20130.1
Cytoplasmic peptidoglycan synthetase domain protein; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713: IPR013221: IPR004101; KEGG: chu:CHU_1348 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR:UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl -meso-diaminopimelateligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain.
  
     0.568
ADR23314.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.540
ADR23315.1
Protein of unknown function DUF195; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: aas:Aasi_1321 hypothetical protein; PFAM: protein of unknown function DUF195; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2681); RmuC family.
       0.497
ADR23665.1
KEGG: dfe:Dfer_3465 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: caa(3)-type oxidase, subunit IV.
  
     0.444
ADR22535.1
InterPro IPR019852; KEGG: chu:CHU_0172 gliding motility-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldL; TIGRFAM: gliding motility-associated protein GldL.
  
     0.442
ADR20746.1
InterPro IPR005632; KEGG: dfe:Dfer_3973 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like).
  
     0.432
ADR21512.1
Fibronectin type III domain protein; InterPro IPR003961: IPR000209: IPR006162; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Fibronectin type III domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; SMART: Fibronectin type III domain protein; SPTR: Regulatory P domain of the subtilisin-like proprotein convertases and other protease; PFAM: Fibronectin type III domain; Subtilase family.
 
     0.407
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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