STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23318.1InterPro IPR020018; KEGG: sli:Slin_5969 gliding motility-associated lipoprotein GldH; SPTR: GldH, putative; TIGRFAM: gliding motility-associated lipoprotein GldH; TIGRFAM: gliding motility-associated lipoprotein GldH. (155 aa)    
Predicted Functional Partners:
ADR23319.1
PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: sli:Slin_5965 PSP1 domain protein; PFAM: PSP1 domain protein; SPTR: Fjo17; PFAM: PSP1 C-terminal conserved region.
 
     0.834
ADR21978.1
InterPro IPR019850; KEGG: dfe:Dfer_4560 protein involved in gliding motility GldD; SPTR: Protein involved in gliding motility GldD; TIGRFAM: gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
   
 0.709
ADR22474.1
Hypothetical protein; InterPro IPR006162; KEGG: aas:Aasi_0778 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.663
ADR22535.1
InterPro IPR019852; KEGG: chu:CHU_0172 gliding motility-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldL; TIGRFAM: gliding motility-associated protein GldL.
  
   
 0.596
ADR22170.1
Gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR019868: IPR005532; KEGG: chu:CHU_3494 gliding motility-related protein; serine kinase; PFAM: protein of unknown function DUF323; SPTR: Possible gliding motility-related protein; possible serine kinase; TIGRFAM: gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ.
  
   
 0.574
ADR20072.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: dfe:Dfer_3011 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.572
ADR22537.1
Gliding motility associated protein GldN; InterPro IPR019847; KEGG: aas:Aasi_1512 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility associated protien GldN; TIGRFAM: gliding motility associated protien GldN.
  
     0.551
ADR22233.1
KEGG: chu:CHU_3306 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.530
ADR22536.1
Gliding motility-associated protein GldM; InterPro IPR019859; KEGG: aas:Aasi_0253 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldM; PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM.
  
   
 0.529
ADR22540.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR003107: IPR013026: IPR001440; KEGG: chu:CHU_0177 TPR repeat-containing gliding mobility protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Gliding motility-related protein; TPR repeat-containing protein.
 
   
 0.519
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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