STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23356.1CHASE2 domain protein; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890; KEGG: chu:CHU_3026 hypothetical protein; PFAM: CHASE2 domain protein; SPTR: Putative uncharacterized protein; PFAM: CHASE2 domain. (426 aa)    
Predicted Functional Partners:
ADR21429.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_3775 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein.
 
     0.794
ADR21015.1
Tetratricopeptide TPR_3 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR011716: IPR001440; KEGG: chu:CHU_3775 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_3 repeat-containing protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat family; PFAM: Tetratricopeptide repeat.
 
     0.783
ADR21148.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_1214 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein.
 
     0.782
ADR23355.1
Hypothetical protein; InterPro IPR000634; KEGG: chu:CHU_3027 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.781
ADR23196.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR001440: IPR019734: IPR013026; KEGG: chu:CHU_3775 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat family.
 
     0.777
ADR22179.1
Cyclic nucleotide-binding protein; COGs: COG3202 ATP/ADP translocase; InterPro IPR000595; KEGG: chu:CHU_1022 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
 
     0.752
ADR23527.1
Protein of unknown function DUF1800; COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: chu:CHU_3363 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800).
  
     0.746
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
 
     0.728
ADR23160.1
FG-GAP repeat protein; InterPro IPR013517: IPR018294; KEGG: mxa:MXAN_1046 FG-GAP repeat-HVR domain-containing protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat domain protein.
  
     0.719
ADR21099.1
Peptidase C14 caspase catalytic subunit p20; InterPro IPR011600; KEGG: hch:HCH_04244 TPR repeat-containing protein; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Tetratricopeptide repeat family protein, putative; PFAM: Caspase domain.
 
     0.712
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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