STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23364.1TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: gfo:GFO_1085 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor, putative; PFAM: TonB-dependent Receptor Plug Domain. (628 aa)    
Predicted Functional Partners:
ADR23363.1
KEGG: fjo:Fjoh_0092 hypothetical protein; SPTR: Putative surface layer protein.
 
    0.950
ADR23362.1
Thioesterase superfamily protein; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: phe:Phep_2501 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Long-chain acyl-CoA thioester hydrolase family protein; PFAM: Thioesterase superfamily.
       0.774
ADR23361.1
KEGG: msv:Mesil_3075 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR23359.1
ATP binding protein; COGs: COG2102 ATPase of PP-loop superfamily; InterPro IPR002761; KEGG: gfo:GFO_1866 ATP-binding domain-containing protein; PFAM: protein of unknown function DUF71 ATP-binding region; SPTR: Putative uncharacterized protein; TIGRFAM: ATP binding protein; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain.
       0.627
ADR23360.1
KEGG: zpr:ZPR_0946 membrane protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3667).
       0.610
ADR23410.1
EppA_BapA family protein; InterPro IPR009894; KEGG: chu:CHU_1567 hypothetical protein; PFAM: EppA_BapA family protein; SPTR: Putative uncharacterized protein.
  
     0.418
ADR22820.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 
 0.406
ADR22530.1
Hypothetical protein; KEGG: chu:CHU_0166 outer membrane protein; SPTR: Outer membrane protein, OMP85 family, putative.
  
     0.402
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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