STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23370.1Hypothetical protein; COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: nwa:Nwat_1668 hypothetical protein; SPTR: Divalent cation-transport integral membrane protein mntH; PFAM: NADPH-dependent FMN reductase. (248 aa)    
Predicted Functional Partners:
ADR22498.1
COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337: IPR006379: IPR001830; KEGG: cpi:Cpin_4022 trehalose-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB.
   
    0.680
ADR22157.1
COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177: IPR008331; KEGG: gfo:GFO_2047 Dps family ferritin-like DNA-binding protein; PFAM: Ferritin Dps family protein; SPTR: Dps family ferritin-like DNA-binding protein; PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.636
ADR23369.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: rhi:NGR_b02990 putative major facilitator family transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily (MFS_1) transporter; PFAM: Major Facilitator Superfamily.
  
  
 0.454
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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