STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23397.1Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cpi:Cpin_0954 efflux transporter, RND family, MFP subunit; SPTR: ABC transporter permease; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit. (417 aa)    
Predicted Functional Partners:
ADR23399.1
InterPro IPR003838; KEGG: cpi:Cpin_2954 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
 
 0.870
ADR23402.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_4595 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.870
ADR23403.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: zpr:ZPR_4641 putative FtsX-related transmembrane transport protein; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
 
 0.870
ADR23400.1
InterPro IPR003838; KEGG: cpi:Cpin_0958 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative ABC transporter permease; PFAM: Predicted permease.
 
   0.864
ADR23404.1
InterPro IPR003838; KEGG: cpi:Cpin_2464 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative transporter permease protein; PFAM: Predicted permease.
 
 
 0.860
ADR23398.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: cpi:Cpin_0956 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transport system, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group.
 
   0.855
ADR23401.1
InterPro IPR003838; KEGG: sli:Slin_4615 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
   0.813
ADR23405.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: dfe:Dfer_4898 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transport system, ATP-binding protein; PFAM: ABC transporter.
 
   0.800
ADR23385.1
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR005467: IPR004358: IPR003594; KEGG: cpi:Cpin_0952 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.783
ADR21836.1
Histidine kinase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594: IPR004358: IPR005467; KEGG: cpi:Cpin_0952 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.781
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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