STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23417.1Plasmid stabilization system; InterPro IPR007712; KEGG: cat:CA2559_06885 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein. (98 aa)    
Predicted Functional Partners:
ADR23416.1
KEGG: cat:CA2559_06880 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
 
 
 0.973
ADR22926.1
KEGG: syp:SYNPCC7002_A1818 CopG family transcriptional regulator; SPTR: Predicted transcriptional regulator, copG family; PFAM: Ribbon-helix-helix protein, copG family.
  
 
 0.670
ADR21418.1
InterPro IPR005360; KEGG: cpb:Cphamn1_1160 putative addiction module antidote protein, CopG/Arc/MetJ family; SPTR: Putative uncharacterized protein; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
 
 
 0.582
ADR23536.1
Hypothetical protein; KEGG: sli:Slin_0023 DNA polymerase III, subunits gamma and tau; SPTR: DNA polymerase III, subunits gamma and tau.
  
     0.473
ADR23418.1
Bifunctional deaminase-reductase domain protein; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: vfi:VF_1675 pyrimidine reductase; PFAM: bifunctional deaminase-reductase domain protein; SPTR: Pyrimidine reductase; PFAM: RibD C-terminal domain.
       0.425
ADR23415.1
Hypothetical protein; KEGG: mvo:Mvol_1026 DNA-directed RNA polymerase, subunit A''; SPTR: DNA-directed RNA polymerase, subunit A''.
       0.404
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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