STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23466.1Putative type IIS restriction/modification enzyme; COGs: COG1002 Type II restriction enzyme methylase subunits; InterPro IPR002052: IPR002296; KEGG: mar:MAE_63060 putative type IIS restriction/modification enzyme; SPTR: Putative type IIS restriction/modification enzyme; PFAM: Eco57I restriction endonuclease. (1247 aa)    
Predicted Functional Partners:
ADR23465.1
KEGG: sbo:SBO_1137 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20836.1
Protein of unknown function DUF814; COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616: IPR008532; KEGG: dfe:Dfer_2016 protein of unknown function DUF814; PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).
  
  
 0.696
ADR20138.1
DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR003593: IPR004483; KEGG: abi:Aboo_0955 DNA helicase; SMART: AAA ATPase; SPTR: DNA helicase, putative; TIGRFAM: DNA helicase; PFAM: Type III restriction enzyme, res subunit; TIGRFAM: DNA helicase, putative.
  
    0.630
ADR22553.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: dfe:Dfer_4582 superfamily I DNA helicase; SPTR: Superfamily I DNA helicase.
  
    0.630
ADR23464.1
KEGG: chu:CHU_2945 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.613
ADR22674.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_2819 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
  
     0.556
ADR23463.1
KEGG: fma:FMG_0739 hypothetical protein; SPTR: DNA helicase.
       0.500
ADR23467.1
Metallophosphoesterase; InterPro IPR004843; KEGG: chu:CHU_2932 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
       0.487
ADR23468.1
Hypothetical protein.
       0.487
ADR21933.1
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR003356: IPR002296; KEGG: aat:D11S_1858 putative N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA Methylase family; PFAM: N-6 DNA Methylase.
 
    0.408
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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