STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23477.1COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: lip:LIA029 chromosome-partitioning ATPase; SPTR: Chromosome-partitioning ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (257 aa)    
Predicted Functional Partners:
ADR23721.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: chu:CHU_2561 chromosome partitioning protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative chromosome partitioning protein parB; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
 
 0.928
ADR22640.1
Hypothetical protein; KEGG: hbu:Hbut_1584 transcriptional regulator; SPTR: Putative ParB-like nuclease domain protein; PFAM: ParB-like nuclease domain.
  
 
 0.617
ADR23478.1
KEGG: zpr:ZPR_3424 DNA primase; SPTR: Mobilizable transposon, excision protein.
  
  
 0.487
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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