STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23491.1Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: zpr:ZPR_4165 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200. (260 aa)    
Predicted Functional Partners:
ADR23492.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: zpr:ZPR_4162 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein.
 
     0.949
ADR23493.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bth:BT_0672 drug efflux protein; PFAM: acriflavin resistance protein; SPTR: Putative ABC transport system, membrane protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.636
ADR23490.1
Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: zpr:ZPR_4165 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200.
 
    
0.581
ADR23489.1
Hypothetical protein; KEGG: cqu:CpipJ_CPIJ007349 zinc finger protein 225; SPTR: Lysine-arginine-ornithine-binding periplasmic protein.
       0.440
ADR21049.1
3'-5' exonuclease, PolB; InterPro IPR019288; KEGG: rbi:RB2501_05965 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: Putative uncharacterized protein; PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB.
  
     0.433
ADR22155.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: phe:Phep_1912 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.427
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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