STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23497.1Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: dfe:Dfer_5044 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat. (236 aa)    
Predicted Functional Partners:
ADR22653.1
InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_0003 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat containing protein; PFAM: Tetratricopeptide repeat.
 
     0.770
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.462
ADR23498.1
Saccharopine dehydrogenase; COGs: COG3268 conserved hypothetical protein; InterPro IPR005097; KEGG: ilo:IL1477 hypothetical protein; PFAM: Saccharopine dehydrogenase; SPTR: Uncharacterized conserved membrane protein; PFAM: Saccharopine dehydrogenase.
       0.455
ADR23499.1
NUDIX hydrolase; InterPro IPR000086; KEGG: dfe:Dfer_5005 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
       0.455
ADR23458.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019734: IPR013026: IPR001440; KEGG: cyh:Cyan8802_3282 chromosome partitioning ATPase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: ATPase involved in chromosome partitioning-like protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Tetratricopeptide repeat.
 
     0.420
ADR20503.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440: IPR019734: IPR013026; KEGG: aas:Aasi_0827 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
     0.416
ADR20105.1
WD-40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterProIPR020472: IPR019781: IPR001680: IPR019782: IPR 017986: IPR019775; KEGG: chu:CHU_0759 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat-protein; PFAM: WD domain, G-beta repeat.
  
     0.412
ADR23500.1
KEGG: amr:AM1_3691 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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