STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23514.1Hypothetical protein; InterPro IPR019777; KEGG: csc:Csac_2528 hypothetical protein; SPTR: Putative Phenylalanine racemase (ATP-hydrolyzing). (234 aa)    
Predicted Functional Partners:
ADR23515.1
KEGG: sli:Slin_5493 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR23516.1
InterPro IPR013211; KEGG: dfe:Dfer_0081 LVIVD repeat protein; PFAM: LVIVD repeat-containing protein; SPTR: LVIVD repeat protein.
       0.701
ADR23517.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR019734: IPR013026: IPR001440: IPR010317: IPR 010822; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; protein of unknown function DUF916 cell surface; Stage II sporulation protein E; SMART: Tetratricopeptide repeat; SPTR: Serine/threonine protein kinases; PFAM: Tetratricopeptide repeat; Stage II sporulation protein E (SpoIIE).
       0.462
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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