STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23528.1Protein of unknown function DUF1501; COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR010869; KEGG: chu:CHU_3364 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501). (566 aa)    
Predicted Functional Partners:
ADR23527.1
Protein of unknown function DUF1800; COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: chu:CHU_3363 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800).
 
     0.950
ADR23529.1
KEGG: chu:CHU_3365 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.782
ADR23530.1
KEGG: chu:CHU_3366 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.782
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
  
     0.743
ADR22179.1
Cyclic nucleotide-binding protein; COGs: COG3202 ATP/ADP translocase; InterPro IPR000595; KEGG: chu:CHU_1022 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
  
     0.737
ADR20873.1
Hypothetical protein; InterPro IPR019775: IPR019782: IPR017986: IPR001680; KEGG: chu:CHU_1024 hypothetical protein; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
  
     0.723
ADR23356.1
CHASE2 domain protein; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890; KEGG: chu:CHU_3026 hypothetical protein; PFAM: CHASE2 domain protein; SPTR: Putative uncharacterized protein; PFAM: CHASE2 domain.
  
     0.712
ADR21148.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_1214 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.709
ADR22174.1
Fibronectin type III domain protein; InterPro IPR003961: IPR008162; KEGG: sdn:Sden_3728 cadherin; PFAM: Fibronectin type III domain protein; SPTR: Cadherin.
  
     0.681
ADR20876.1
Conserved repeat domain protein; InterPro IPR000601: IPR001434; KEGG: chu:CHU_1906 CHU large protein, SAP or adhesin AidA-related; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: CHU large protein, possible SAP or adhesin AidA-related; TIGRFAM: conserved repeat domain protein.
  
     0.637
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.