STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23538.1Response regulator receiver; InterPro IPR001789; KEGG: chu:CHU_3028 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain. (138 aa)    
Predicted Functional Partners:
ADR23537.1
KEGG: chu:CHU_1960 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078); Protein of unknown function, DUF481.
 
     0.723
ADR22619.1
Hypothetical protein; KEGG: chu:CHU_3774 histidine kinase; SPTR: Putative uncharacterized protein.
 
     0.615
ADR23704.1
Putative PAS/PAC sensor protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000014: IPR000700: IPR003660: IPR003018: IPR 013767: IPR010822; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: PAS fold domain protein; histidine kinase HAMP region domain protein; GAF domain protein; Stage II sporulation protein E; SMART: PAS domain containing protein; SPTR: Serine/threonine protein kinases; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.
 
     0.571
ADR20132.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR013655: IPR003661: IPR003594: IPR 000014: IPR005467: IPR000700; KEGG: chu:CHU_3091 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Two-component hybrid sensor and regulator, putative; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) dom [...]
 
   
 0.535
ADR22604.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594: IPR005467: IPR011622: IPR011623: IPR 004358; KEGG: chu:CHU_2797 sensor kinase of Zn/Pb responsive two-component regulatory system; PFAM: Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Periplasmic Sensor Hybrid Histidine Kinase; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoaccept [...]
 
     0.534
ADR22890.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR000014: IPR003594: IPR013655: IPR 004358; KEGG: zpr:ZPR_2477 histidine kinase sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
 
   
 0.525
ADR21260.1
KEGG: slt:Slit_0937 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.521
ADR22279.1
PAS sensor protein; InterPro IPR000014: IPR000700; KEGG: mev:Metev_0453 signal transduction histidine kinase; SPTR: Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
  
     0.515
ADR23524.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR005467: IPR000700: IPR004358: IPR 001610: IPR003661: IPR003594: IPR013655; KEGG: zpr:ZPR_2293 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DN [...]
 
   
 0.510
ADR20414.1
COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014: IPR004358: IPR013767: IPR013655: IPR 003661: IPR003594: IPR001610: IPR005467: IPR000700; KEGG: cyn:Cyan7425_3017 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Sensory transduction histidine k [...]
 
   
 0.508
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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