STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23540.1COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: dfe:Dfer_2897 O-methyltransferase family 3; PFAM: O-methyltransferase family 3; SPTR: O-methyltransferase family 3; PFAM: O-methyltransferase. (214 aa)    
Predicted Functional Partners:
ADR23294.1
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.901
ADR23560.1
Rhodanese domain protein; COGs: COG1054 sulfurtransferase; InterPro IPR001763: IPR020936; KEGG: chu:CHU_2691 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: UPF0176 protein ALPR1_03445; PFAM: Rhodanese-like domain; Belongs to the UPF0176 family.
    
 0.900
ADR23605.1
3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904: IPR002347: IPR002198; KEGG: rmr:Rmar_2450 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase.
 
  
   0.886
ADR23541.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: dfe:Dfer_2952 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
  
   0.795
ADR23539.1
Peptidoglycan-binding lysin domain; InterPro IPR002482: IPR008258: IPR018392; KEGG: aas:Aasi_0565 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase catalytic; SMART: Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; LysM domain.
       0.789
ADR23542.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pdi:BDI_2815 mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
    0.546
ADR22150.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR020904; KEGG: bse:Bsel_0954 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
 
  
   0.522
ADR23538.1
Response regulator receiver; InterPro IPR001789; KEGG: chu:CHU_3028 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain.
       0.475
ADR23537.1
KEGG: chu:CHU_1960 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078); Protein of unknown function, DUF481.
       0.467
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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