STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23542.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pdi:BDI_2815 mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase, group 1 family protein; PFAM: Glycosyl transferases group 1. (377 aa)    
Predicted Functional Partners:
ADR23541.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: dfe:Dfer_2952 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
 
     0.606
ADR20589.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cph:Cpha266_0355 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
 
     0.556
ADR23540.1
COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: dfe:Dfer_2897 O-methyltransferase family 3; PFAM: O-methyltransferase family 3; SPTR: O-methyltransferase family 3; PFAM: O-methyltransferase.
  
    0.546
ADR23539.1
Peptidoglycan-binding lysin domain; InterPro IPR002482: IPR008258: IPR018392; KEGG: aas:Aasi_0565 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase catalytic; SMART: Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; LysM domain.
  
    0.540
ADR21813.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: str:Sterm_3098 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.503
ADR23544.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0802 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
  
     0.452
ADR20477.1
Alpha amylase catalytic region; InterPro IPR006046: IPR006047: IPR015237: IPR006589; KEGG: fjo:Fjoh_1948 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; Domain of unknown function DUF1939; SMART: alpha amylase catalytic sub domain; SPTR: Candidate alpha amylase; Glycoside hydrolase family 13; PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939); Belongs to the glycosyl hydrolase 13 family.
   
  0.451
ADR20734.1
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047; KEGG: sli:Slin_0361 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: Alpha-amylase; PFAM: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
   
  0.451
ADR23381.1
Glycoside hydrolase family 13 domain protein; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047: IPR006048; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase family 13 protein; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
   
  0.451
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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