STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23544.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0802 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1. (405 aa)    
Predicted Functional Partners:
ADR23381.1
Glycoside hydrolase family 13 domain protein; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047: IPR006048; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase family 13 protein; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
 
  0.983
ADR23546.1
Glycogen(starch) synthase; InterPro IPR008631; KEGG: chu:CHU_1581 glycogen synthase, glycosyltransferase family 3 protein; PFAM: glycogen synthase; PRIAM: Glycogen(starch) synthase; SPTR: Candidate glycogen synthase, Glycosyltransferase Family 3 protein; PFAM: Glycogen synthase.
 
  
  0.956
ADR23543.1
Glycoside hydrolase family 57; InterPro IPR004300; KEGG: pdi:BDI_0210 alpha-glycosidase; PFAM: glycoside hydrolase family 57; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolase family 57.
 
    0.949
ADR22498.1
COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337: IPR006379: IPR001830; KEGG: cpi:Cpin_4022 trehalose-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB.
  
 0.926
ADR22036.1
COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: sli:Slin_4463 starch synthase; PFAM: Starch synthase catalytic domain-containing protein; SPTR: Glycogen synthase; PFAM: Starch synthase catalytic domain.
     
 0.902
ADR20600.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR001509; KEGG: cff:CFF8240_1396 WbnF; PFAM: NAD-dependent epimerase/dehydratase; SPTR: WbnF; PFAM: NAD dependent epimerase/dehydratase family.
   
 
  0.820
ADR22643.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: cpc:Cpar_1802 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
   
 
  0.820
ADR23545.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: chu:CHU_0803 A-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: A-glucosidase, glycoside hydrolase family 31 protein; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.765
ADR23547.1
KEGG: sli:Slin_5436 putative cytoplasmic protein; SPTR: Putative uncharacterized protein.
 
     0.550
ADR20584.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: amr:AM1_4833 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
  
     0.488
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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