STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23558.1KEGG: chu:CHU_2695 hypothetical protein; SPTR: Membrane protein, putative. (416 aa)    
Predicted Functional Partners:
ADR23557.1
KEGG: sli:Slin_0436 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2851).
       0.789
ADR23676.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0063 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
     0.766
ADR22656.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: chu:CHU_3844 polysaccharide export periplasmic protein; PFAM: polysaccharide export protein; SPTR: Periplasmic protein involved in polysaccharide export; manually curated; PFAM: Polysaccharide biosynthesis/export protein.
  
     0.744
ADR21765.1
KEGG: chu:CHU_3409 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
ADR22207.1
KEGG: abo:ABO_0921 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.736
ADR23411.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.734
ADR20482.1
InterPro IPR000866: IPR017936; KEGG: tth:TT_P0168 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family.
  
     0.675
ADR22385.1
KEGG: chu:CHU_3705 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.666
ADR22179.1
Cyclic nucleotide-binding protein; COGs: COG3202 ATP/ADP translocase; InterPro IPR000595; KEGG: chu:CHU_1022 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
  
     0.610
ADR20808.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2993 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Possible outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
     0.606
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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