STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23582.1Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: lil:LA_1541 putative phospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Prolyl oligopeptidase family; PFAM: Prolyl oligopeptidase family. (274 aa)    
Predicted Functional Partners:
ADR23583.1
KEGG: sli:Slin_1746 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.613
ADR23584.1
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: kko:Kkor_0381 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: 2-aminomuconate deaminase; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
       0.613
ADR23581.1
Kynurenine formamidase; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: zpr:ZPR_4198 putative cyclase; PFAM: cyclase family protein; SPTR: Putative cyclase; PFAM: Putative cyclase.
       0.553
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.