STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23583.1KEGG: sli:Slin_1746 hypothetical protein; SPTR: Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
ADR23584.1
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: kko:Kkor_0381 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: 2-aminomuconate deaminase; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
       0.773
ADR21191.1
KEGG: sli:Slin_2807 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.639
ADR23582.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: lil:LA_1541 putative phospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Prolyl oligopeptidase family; PFAM: Prolyl oligopeptidase family.
       0.613
ADR20939.1
KEGG: dfe:Dfer_2924 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
ADR20963.1
InterPro IPR003111; KEGG: sli:Slin_5613 peptidase S16 lon domain protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; SPTR: ATP-dependent Lon protease, putative; PFAM: ATP-dependent protease La (LON) domain.
  
     0.480
ADR23257.1
MATE efflux family protein; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpi:Cpin_0545 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Putative uncharacterized protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
     0.477
ADR22172.1
KEGG: dfe:Dfer_4669 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.462
ADR21059.1
KEGG: sli:Slin_5723 transcriptional regulator, TetR family; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.454
ADR23581.1
Kynurenine formamidase; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: zpr:ZPR_4198 putative cyclase; PFAM: cyclase family protein; SPTR: Putative cyclase; PFAM: Putative cyclase.
       0.439
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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