STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23622.1Helix-turn-helix domain protein; InterPro IPR001387: IPR010359; KEGG: dfe:Dfer_2636 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; Domain of unknown function (DUF955). (494 aa)    
Predicted Functional Partners:
ADR23621.1
COGs: COG2225 Malate synthase; InterPro IPR011076: IPR006252: IPR019830; KEGG: sti:Sthe_2906 malate synthase A; PFAM: Malate synthase family protein; PRIAM: Malate synthase; SPTR: Malate synthase; TIGRFAM: malate synthase A; PFAM: Malate synthase; TIGRFAM: malate synthase A.
 
   
 0.698
ADR23620.1
COGs: COG2224 Isocitrate lyase; InterPro IPR000918: IPR006254: IPR018523; KEGG: fjo:Fjoh_1739 isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase.
 
   
 0.581
ADR23623.1
KEGG: rbi:RB2501_09420 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892).
       0.497
ADR22583.1
KEGG: dfe:Dfer_4875 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.464
ADR21406.1
PDZ/DHR/GLGF domain protein; InterPro IPR001478: IPR001969; KEGG: phe:Phep_0001 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; PFAM: Retroviral aspartyl protease; PDZ domain (Also known as DHR or GLGF).
  
     0.435
ADR20252.1
HipA domain protein; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894: IPR012893; KEGG: plt:Plut_1315 hypothetical protein; PFAM: HipA domain protein; SPTR: Putative uncharacterized protein; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain.
  
 
 0.433
ADR21187.1
KEGG: dfe:Dfer_2683 conserved hypothetical protein, secreted; SPTR: Branched-chain amino acid aminotransferase.
  
     0.420
ADR22376.1
KEGG: sli:Slin_0763 hypothetical protein; SPTR: Lipoprotein, putative.
  
    0.419
ADR21954.1
COGs: COG4185 conserved hypothetical protein; KEGG: bvu:BVU_1630 hypothetical protein; SPTR: Uncharacterized protein conserved in bacteria; PFAM: Zeta toxin.
   
 
 0.406
ADR21675.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835: IPR000792; KEGG: sli:Slin_4426 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: MarR family protein; PFAM: MarR family.
  
 
 0.404
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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