STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23627.1Hypothetical protein; InterPro IPR009056; KEGG: net:Neut_1281 iron permease FTR1; SPTR: Iron permease FTR1. (322 aa)    
Predicted Functional Partners:
ADR21605.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR003468: IPR009056: IPR004677; KEGG: sli:Slin_3562 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cyt [...]
  
 
 0.955
ADR22370.1
Hypothetical protein; InterPro IPR017941; KEGG: fps:FP2365 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
 
 0.734
ADR23626.1
KEGG: chu:CHU_0350 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
ADR23628.1
Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cpi:Cpin_2027 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator).
  
    0.587
ADR23625.1
Hypothetical protein; KEGG: chu:CHU_2225 gliding motility-related protein; adhesin AidA-related; SPTR: Lipoprotein, putative.
       0.584
ADR23659.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.546
ADR23660.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: chu:CHU_2206 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.545
ADR22722.1
COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: lbf:LBF_2854 nitric oxide reductase large subunit; PFAM: cytochrome c oxidase subunit I; PRIAM: Nitric-oxide reductase; SPTR: Nitric-oxide reductase subunit B; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.543
ADR22701.1
Cytochrome-c oxidase; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_1398 cbb3-type cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I.
  
 
 0.531
ADR22702.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056: IPR003468: IPR003088; KEGG: gfo:GFO_1397 cbb3-type cytochrome c oxidase subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; SPTR: Cbb3-type cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.530
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.