STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23632.1KEGG: chu:CHU_1740 hypothetical protein; SPTR: Putative uncharacterized protein. (422 aa)    
Predicted Functional Partners:
ADR22878.1
KEGG: dfe:Dfer_0450 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.783
ADR22359.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: dfe:Dfer_3800 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.775
ADR21891.1
KEGG: dfe:Dfer_2587 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.774
ADR22987.1
InterPro IPR011933; KEGG: sli:Slin_1217 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
  
     0.774
ADR22353.1
KEGG: chu:CHU_3505 hypothetical protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.770
ADR21476.1
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dfe:Dfer_4773 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
  
     0.758
ADR23506.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR013973; KEGG: sli:Slin_3042 response regulator receiver protein; PFAM: PglZ domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: PglZ domain; Response regulator receiver domain.
  
     0.580
ADR23633.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: dfe:Dfer_5607 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter efflux protein; PFAM: Predicted permease.
       0.577
ADR22629.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR005467: IPR004358; KEGG: sli:Slin_3618 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.566
ADR21761.1
Outer membrane chaperone Skp (OmpH); InterPro IPR005632; KEGG: chu:CHU_3413 OmpH family outer membrane protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, ompH family; PFAM: Outer membrane protein (OmpH-like).
  
     0.531
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.