STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23636.1TonB-dependent receptor plug; InterPro IPR012910; KEGG: zpr:ZPR_2427 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain. (716 aa)    
Predicted Functional Partners:
ADR23637.1
KEGG: zpr:ZPR_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.899
ADR22891.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: zpr:ZPR_2068 membrane protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
  
     0.664
ADR21369.1
KEGG: cpi:Cpin_5460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.573
ADR23159.1
KEGG: cat:CA2559_01615 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.542
ADR23635.1
InterPro IPR000209: IPR006162; KEGG: hoh:Hoch_5489 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Protease; PFAM: Subtilase family.
 
     0.495
ADR21657.1
Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: cat:CA2559_10573 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200.
  
     0.459
ADR22429.1
KEGG: fps:FP0285 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative serine esterase (DUF676).
  
     0.452
ADR22893.1
KEGG: zpr:ZPR_1190 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.452
ADR23128.1
PKD domain containing protein; InterPro IPR000601: IPR007110; KEGG: dfe:Dfer_3689 PKD domain containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain.
  
 
   0.451
ADR21238.1
LytTr DNA-binding region; InterPro IPR007492; KEGG: fjo:Fjoh_0682 response regulator receiver protein; PFAM: LytTr DNA-binding region; SPTR: Response regulator receiver protein; PFAM: LytTr DNA-binding domain.
 
     0.436
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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