STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23644.1KEGG: mmr:Mmar10_1145 hypothetical protein; SPTR: Putative uncharacterized protein. (183 aa)    
Predicted Functional Partners:
ADR23643.1
Domain of unknown function DUF1801; InterPro IPR014922; KEGG: lsp:Bsph_2455 hypothetical protein; PFAM: Domain of unknown function DUF1801; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DU1801).
 
     0.801
ADR23645.1
KEGG: sdn:Sden_1975 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.590
ADR23050.1
InterPro IPR004360; KEGG: pat:Patl_1435 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.543
ADR22782.1
KEGG: rmr:Rmar_2561 hypothetical protein; SPTR: Outer membrane lipoprotein, putative.
  
     0.497
ADR22781.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: rmr:Rmar_2560 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane protein, putative; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor.
  
     0.464
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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