STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23661.1Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: phe:Phep_0296 cytochrome oxidase assembly; PFAM: cytochrome oxidase assembly; SPTR: Cytochrome oxidase assembly protein; PFAM: Cytochrome oxidase assembly protein. (366 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.997
ADR23660.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: chu:CHU_2206 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.923
ADR23659.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.895
ADR23663.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: sli:Slin_5674 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: Probable cytochrome-c oxidase transmembrane protein; PFAM: Cytochrome c oxidase subunit III.
 
  
 0.895
ADR23664.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: sli:Slin_5675 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III.
 
  
 0.882
ADR23658.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2; KEGG: chu:CHU_2208 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.690
ADR23667.1
Protein of unknown function DUF420; COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: sli:Slin_5678 protein of unknown function DUF420; PFAM: protein of unknown function DUF420; SPTR: YozB; PFAM: Protein of unknown function (DUF420).
  
    0.657
ADR23666.1
Hypothetical protein; KEGG: sli:Slin_5677 electron transport protein SCO1/SenC; SPTR: Putative uncharacterized protein.
  
 
 0.627
ADR23656.1
Quinol:cytochrome c oxidoreductase membrane protein; KEGG: chu:CHU_2210 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341).
  
  
 0.624
ADR23655.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: dfe:Dfer_3475 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulfide reductase chain C; PFAM: Polysulphide reductase, NrfD.
     
 0.619
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.