STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23696.1PKD domain containing protein; InterPro IPR000601; KEGG: fjo:Fjoh_1272 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain. (656 aa)    
Predicted Functional Partners:
ADR23697.1
COGs: COG4995 conserved hypothetical protein; InterPro IPR005479; KEGG: fjo:Fjoh_1271 hypothetical protein; SPTR: Uncharacterized protein.
 
     0.949
ADR23695.1
KEGG: fjo:Fjoh_1273 hypothetical protein; SPTR: Hypothetical lipoprotein.
 
    0.877
ADR23693.1
Hypothetical protein; InterPro IPR013026; KEGG: fjo:Fjoh_1276 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.844
ADR23694.1
InterPro IPR014284; KEGG: fjo:Fjoh_1275 ECF subfamily RNA polymerase sigma-24 factor; SPTR: ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
    0.841
ADR23698.1
Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
       0.773
ADR22432.1
Hypothetical protein; InterPro IPR006626; KEGG: dfe:Dfer_1942 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.510
ADR20286.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR001440: IPR019734: IPR013026; KEGG: chu:CHU_0283 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_3.
 
     0.489
ADR20722.1
KEGG: gfo:GFO_0336 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807).
  
     0.481
ADR20906.1
Hemagluttinin repeat-containing protein; InterPro IPR008619; KEGG: cpi:Cpin_4916 hypothetical protein; PFAM: Haemagluttinin repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.463
ADR20183.1
KEGG: tdn:Suden_0109 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.461
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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