STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23698.1Methyltransferase small; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). (237 aa)    
Predicted Functional Partners:
ADR23696.1
PKD domain containing protein; InterPro IPR000601; KEGG: fjo:Fjoh_1272 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain.
       0.773
ADR23697.1
COGs: COG4995 conserved hypothetical protein; InterPro IPR005479; KEGG: fjo:Fjoh_1271 hypothetical protein; SPTR: Uncharacterized protein.
       0.773
ADR22770.1
COGs: COG0313 methyltransferase; KEGG: meh:M301_1327 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family.
  
  
 0.523
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.521
ADR23695.1
KEGG: fjo:Fjoh_1273 hypothetical protein; SPTR: Hypothetical lipoprotein.
       0.413
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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