STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23701.1CheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: dae:Dtox_3784 CheB methylesterase; PFAM: CheB methylesterase; PRIAM: Protein-glutamate methylesterase; SPTR: CheB methylesterase; PFAM: CheB methylesterase. (197 aa)    
Predicted Functional Partners:
ADR23700.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780: IPR002052; KEGG: cpi:Cpin_2258 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: CheR methyltransferase, SAM binding domain; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
  
 0.982
ADR20048.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000780: IPR000673: IPR013767: IPR003661: IPR 003594: IPR000014: IPR001610: IPR005467: IPR000700: IPR002052; KEGG: cts:Ctha_1653 signal transduction histidine kinase with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; PAC repeat-containing pr [...]
 
 
0.979
ADR23704.1
Putative PAS/PAC sensor protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000014: IPR000700: IPR003660: IPR003018: IPR 013767: IPR010822; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: PAS fold domain protein; histidine kinase HAMP region domain protein; GAF domain protein; Stage II sporulation protein E; SMART: PAS domain containing protein; SPTR: Serine/threonine protein kinases; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.
 
  
 0.864
ADR23703.1
GAF domain protein; InterPro IPR003018; KEGG: swd:Swoo_1961 multi-sensor hybrid histidine kinase; SMART: GAF domain protein; SPTR: GAF sensor hybrid histidine kinase, putative.
 
     0.838
ADR20199.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: chu:CHU_2629 OmpA family outer membrane protein; PFAM: OmpA/MotB domain protein; SPTR: Outer membrane protein, OmpA family; PFAM: OmpA family.
 
  
 0.814
ADR22576.1
PAS sensor protein; InterPro IPR003018: IPR000014: IPR003660; KEGG: dae:Dtox_3786 GAF sensor hybrid histidine kinase; PFAM: GAF domain protein; histidine kinase HAMP region domain protein; SMART: GAF domain protein; SPTR: Chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain.
 
  
 0.790
ADR20649.1
PAS sensor protein; InterPro IPR000700: IPR003660: IPR003018: IPR000014; KEGG: npu:Npun_R2375 multi-sensor hybrid histidine kinase; PFAM: histidine kinase HAMP region domain protein; SMART: GAF domain protein; histidine kinase HAMP region domain protein; SPTR: Two-component hybrid sensor and regulator, putative; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
 0.785
ADR23702.1
KEGG: ptm:GSPATT00037032001 hypothetical protein; SPTR: Chromosome undetermined scaffold_165, whole genome shotgun sequence.
       0.773
ADR21182.1
Histidine kinase HAMP region domain protein; InterPro IPR003660: IPR003018; KEGG: npu:Npun_R2375 multi-sensor hybrid histidine kinase; PFAM: histidine kinase HAMP region domain protein; GAF domain protein; SMART: GAF domain protein; SPTR: Hamp domain protein; PFAM: HAMP domain; GAF domain.
 
    0.751
ADR20615.1
GAF domain protein; InterPro IPR003018; KEGG: dae:Dtox_3786 GAF sensor hybrid histidine kinase; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: PAS domain S-box protein.
 
     0.745
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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