STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23708.1KEGG: brm:Bmur_0150 apolipoprotein A1/A4/E; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
ADR23709.1
Hypothetical protein; KEGG: ttu:TERTU_4390 MltA-interacting protein MipA; SPTR: Putative uncharacterized protein.
       0.791
ADR23710.1
phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: sli:Slin_0089 hypothetical protein; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Phospholipase/Carboxylesterase.
       0.600
ADR23707.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR013525: IPR017871; KEGG: pdi:BDI_1446 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; SPTR: ABC-2 type transporter family; PFAM: ABC transporter; Tellurite resistance protein TerB; ABC-2 type transporter.
       0.513
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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