STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23711.1Dolichyl-phosphate beta-D-mannosyltransferase; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bth:BT_0251 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2. (255 aa)    
Predicted Functional Partners:
ADR23712.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR005834: IPR006543: IPR006549; KEGG: sli:Slin_5528 hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphat [...]
  
 
 0.618
ADR22111.1
KEGG: chu:CHU_0307 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.583
ADR21507.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: dfe:Dfer_4006 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2.
 
  
 0.530
ADR22158.1
Metallophosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: dfe:Dfer_2991 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: Putative UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase.
  
   
 0.442
ADR21761.1
Outer membrane chaperone Skp (OmpH); InterPro IPR005632; KEGG: chu:CHU_3413 OmpH family outer membrane protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, ompH family; PFAM: Outer membrane protein (OmpH-like).
  
     0.401
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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