STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23726.1COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: aas:Aasi_0641 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel. (538 aa)    
Predicted Functional Partners:
ADR23727.1
KEGG: aas:Aasi_0597 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.778
ADR23724.1
COGs: COG2937 Glycerol-3-phosphate O-acyltransferase; InterPro IPR002123; KEGG: aas:Aasi_0283 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
     0.762
gpsA
COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR011128: IPR006109: IPR006168; KEGG: aas:Aasi_0284 hypothetical protein; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus.
 
     0.730
ADR23725.1
COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: gfo:GFO_3443 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism PLP-dependent enzyme.
  
    0.667
ADR22779.1
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: phe:Phep_1630 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel.
  
     0.602
ADR23728.1
Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR014036: IPR018356; KEGG: cpi:Cpin_0729 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, GntR family protein; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
       0.561
gcvP
Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.497
ADR23718.1
COGs: COG0681 Signal peptidase I; InterPro IPR019759: IPR000223: IPR019758; KEGG: dfe:Dfer_0210 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
  
    0.424
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.415
ADR23729.1
COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076: IPR000447; KEGG: zpr:ZPR_0766 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
     
 0.415
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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