STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23732.1Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: afu:AF1753 lysophospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Lysophospholipase; PFAM: Putative lysophospholipase. (275 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
   
 0.815
ADR23731.1
Major intrinsic protein; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: pdi:BDI_1815 glycerol uptake facilitator protein; PFAM: major intrinsic protein; SPTR: Putative glycerol diffusion channel; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.766
ADR21090.1
Ferredoxin; InterPro IPR017896: IPR017900; KEGG: chu:CHU_2228 ferredoxin; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding.
   
   0.699
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.599
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.599
ADR20997.1
Semialdehyde dehydrogenase NAD - binding protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR000534; KEGG: zpr:ZPR_0284 NAD dependent epimerase/dehydratase protein; PFAM: Semialdehyde dehydrogenase NAD - binding; SPTR: Semialdehyde dehydrogenase NAD-binding; PFAM: NAD dependent epimerase/dehydratase family.
  
   0.489
ADR21320.1
NmrA family protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: sli:Slin_1079 NmrA family protein; SPTR: NmrA-like family protein; PFAM: NmrA-like family.
  
   0.489
ADR21408.1
NAD-dependent epimerase/dehydratase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sli:Slin_5369 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; Protein of unknown function (DUF2867).
  
   0.489
ADR22222.1
Dihydrodipicolinate reductase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR000846; KEGG: bmd:BMD_0685 NAD dependent epimerase/dehydratase; PFAM: dihydrodipicolinate reductase; SPTR: NAD dependent epimerase/dehydratase; PFAM: NmrA-like family.
  
   0.489
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
   0.403
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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