STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23741.1Transcriptional regulator; KEGG: gfo:GFO_2557 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Transcriptional regulator PadR-like family. (72 aa)    
Predicted Functional Partners:
ADR23740.1
KEGG: coc:Coch_0140 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein.
 
     0.905
ADR23075.1
Transcriptional regulator; KEGG: pdi:BDI_1980 hypothetical protein; SPTR: MarR/emrR family transcriptional regulator.
  
     0.775
ADR23742.1
COGs: COG4452 Inner membrane protein involved in colicin E2 resistance; InterPro IPR010364; KEGG: dal:Dalk_1578 hypothetical protein; PFAM: Inner membrane CreD family protein; SPTR: Inner membrane CreD family protein; PFAM: Inner membrane protein CreD.
 
     0.724
ADR23743.1
Hypothetical protein; InterPro IPR020218; KEGG: rbi:RB2501_11977 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.609
ADR23739.1
KEGG: cpi:Cpin_6195 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.430
ADR20176.1
COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515: IPR007210; KEGG: cpi:Cpin_4963 binding-protein-dependent transport systems inner membrane component; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system.
  
  
 0.407
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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