STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX08728.1Conserved hypothetical protein. (56 aa)    
Predicted Functional Partners:
EEX08727.1
Putative K+-dependent Na+/Ca+ exchanger family protein; Identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367.
       0.867
EEX08729.1
Peptidase, family S49; Identified by match to protein family HMM PF01343.
       0.867
EEX08726.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
  
    0.847
EEX11285.1
Putative lipoprotein.
  
     0.613
EEX08730.1
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
       0.558
EEX08731.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.528
EEX09255.1
Rod shape-determining protein RodA.
   
    0.483
EEX10929.1
Conserved hypothetical protein.
  
     0.469
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
Server load: low (22%) [HD]