Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX09862.1PTS system IIA component, Man family; Identified by match to protein family HMM PF03610. (130 aa)    
Predicted Functional Partners:
EEX09863.1
Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
 
 
 0.996
EEX08817.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419.
 
 
 0.908
EEX09859.1
Hpr serine kinase/phosphatase domain protein.
 
   
 0.899
EEX09995.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
    
  0.849
EEX09861.1
ATPase; Identified by match to protein family HMM PF03668; Belongs to the RapZ-like family.
 
     0.844
EEX09858.1
Sensor protein ChvG; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
       0.811
EEX11473.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.807
EEX09860.1
Conserved hypothetical protein.
       0.783
EEX11509.1
Fructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
    
 0.768
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
  0.757
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
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