STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX11099.1Hypothetical protein; Identified by Glimmer3; putative. (65 aa)    
Predicted Functional Partners:
EEX11100.1
Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501.
       0.567
EEX11101.1
Acetyl-coenzyme A synthetase.
       0.567
adk-2
Adenylate kinase (ATP-AMP transphosphorylase); Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
       0.567
EEX11098.1
Trap dicarboxylate transporter, dctp subunit; Identified by match to protein family HMM PF03480.
       0.406
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.