Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX11134.1Allantoate amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879. (416 aa)    
Predicted Functional Partners:
hydA
Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR02033.
 
 
 0.996
EEX11136.1
Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
 
 0.953
EEX11137.1
Glutamate synthase subunit beta; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
 
  0.906
EEX08232.1
Identified by match to protein family HMM PF01522; match to protein family HMM PF09349; match to protein family HMM TIGR03164; match to protein family HMM TIGR03212.
  
 0.872
EEX08228.1
Putative allantoin catabolism protein; Identified by match to protein family HMM PF05899; match to protein family HMM PF07883; match to protein family HMM TIGR03214.
 
 
 0.859
EEX09208.1
Betaine aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
     
  0.848
EEX09263.1
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
     
  0.848
EEX09292.1
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
     
  0.848
EEX11135.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440; match to protein family HMM PF08362.
 
     0.819
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.772
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
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