close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX11134.1Allantoate amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879. (416 aa)    
Predicted Functional Partners:
hydA
Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR02033.
 
 
 0.995
EEX11136.1
Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
 
 0.967
EEX08228.1
Putative allantoin catabolism protein; Identified by match to protein family HMM PF05899; match to protein family HMM PF07883; match to protein family HMM TIGR03214.
 
 
 0.905
EEX11137.1
Glutamate synthase subunit beta; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
 
  0.855
EEX11135.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440; match to protein family HMM PF08362.
 
     0.811
EEX08232.1
Identified by match to protein family HMM PF01522; match to protein family HMM PF09349; match to protein family HMM TIGR03164; match to protein family HMM TIGR03212.
  
 0.796
EEX08519.1
Conserved hypothetical protein.
   
 0.781
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.781
EEX11128.1
NMT1/THI5 like domain protein; Identified by match to protein family HMM PF09084.
 
    0.757
EEX09002.1
Glutamate synthase small chain; Identified by match to protein family HMM PF07992; match to protein family HMM TIGR01318.
  
 
  0.724
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.