STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX11162.1Renal dipeptidase family protein; Overlaps another CDS with the same product name. (240 aa)    
Predicted Functional Partners:
EEX11163.1
Identified by match to protein family HMM PF01244; overlaps another CDS with the same product name.
     0.994
EEX11161.1
Putative oxidoreductase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
    0.545
EEX09151.1
Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.495
EEX11480.1
malate/L-lactate dehydrogenase; Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.495
EEX08249.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
 
    0.478
EEX11160.1
C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.
       0.419
EEX10136.1
Conserved hypothetical protein.
  
     0.415
EEX09214.1
Conserved hypothetical protein.
  
     0.400
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
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