Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX11273.1Conserved hypothetical protein; Identified by match to protein family HMM PF04266. (138 aa)    
Predicted Functional Partners:
EEX11272.1
methylcrotonoyl-CoA carboxylase subunit alpha; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786.
       0.781
EEX11274.1
methylcrotonoyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
       0.765
EEX11271.1
hydroxymethylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
       0.705
EEX11270.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
       0.601
EEX11275.1
Putative 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase.
       0.543
Your Current Organism:
Ruegeria lacuscaerulensis
NCBI taxonomy Id: 644107
Other names: R. lacuscaerulensis ITI-1157, Ruegeria lacuscaerulensis DSM 11314, Ruegeria lacuscaerulensis ITI-1157, Silicibacter lacuscaerulensis KCTC 2953
Server load: low (36%) [HD]