STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QVM3_KOMPGVPS9 domain-containing protein. (419 aa)    
Predicted Functional Partners:
C4R4X6_KOMPG
Beta subunit of the translation initiation factor eIF2B; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.957
C4R3U5_KOMPG
Guanine nucleotide exchange factor.
    
 
 0.729
C4R3D5_KOMPG
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.699
C4QXL9_KOMPG
GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5.
    
 0.648
C4QZ12_KOMPG
GTP-binding protein YPT10.
    
 0.648
C4R771_KOMPG
GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases.
    
 0.648
C4QZM7_KOMPG
V-SNARE coiled-coil homology domain-containing protein.
    
 0.504
C4QV59_KOMPG
Ubiquitin-like domain-containing protein.
    
 0.483
C4R8V1_KOMPG
Ubiquitin.
    
 0.483
C4QYN3_KOMPG
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.471
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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